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  Genome-scale RNAi profiling of cell division in human tissue culture cells

Kittler, R., Pelletier, L., Heninger, A.-K., Slabicki, M., Theis, M., Miroslaw, L., et al. (2007). Genome-scale RNAi profiling of cell division in human tissue culture cells. Nature Cell Biology, 9(12), 1401-1412.

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Genre: Zeitschriftenartikel

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Kittler, Ralf1, Autor           
Pelletier, Laurence1, Autor           
Heninger, Anne-Kristine, Autor
Slabicki, Mikolaj1, Autor           
Theis, Mirko1, Autor           
Miroslaw, Lukasz1, Autor           
Poser, Ina1, Autor           
Lawo, Steffen, Autor
Grabner, Hannes1, Autor           
Kozak, Karol1, Autor           
Wagner, Jan1, Autor           
Surendranath, Vineeth1, Autor           
Richter, Constance1, Autor           
Bowen, Wayne, Autor
Jackson, Aimee L., Autor
Habermann, Bianca1, Autor           
Hyman, Anthony A.1, Autor           
Buchholz, Frank1, Autor           
Affiliations:
1Max Planck Institute of Molecular Cell Biology and Genetics, Max Planck Society, ou_2340692              

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 Zusammenfassung: Cell division is fundamental for all organisms. Here we report a genome-scale RNA-mediated interference screen in HeLa cells designed to identify human genes that are important for cell division. We have used a library of endoribonuclease-prepared short interfering RNAs for gene silencing and have used DNA content analysis to identify genes that induced cell cycle arrest or altered ploidy on silencing. Validation and secondary assays were performed to generate a nine-parameter loss-of-function phenoprint for each of the genes. These phenotypic signatures allowed the assignment of genes to specific functional classes by combining hierarchical clustering, cross-species analysis and proteomic data mining. We highlight the richness of our dataset by ascribing novel functions to genes in mitosis and cytokinesis. In particular, we identify two evolutionarily conserved transcriptional regulatory networks that govern cytokinesis. Our work provides an experimental framework from which the systematic analysis of novel genes necessary for cell division in human cells can begin.

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 Datum: 2007
 Publikationsstatus: Erschienen
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 Identifikatoren: eDoc: 348598
Anderer: 853
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Titel: Nature Cell Biology
Genre der Quelle: Zeitschrift
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Seiten: - Band / Heft: 9 (12) Artikelnummer: - Start- / Endseite: 1401 - 1412 Identifikator: -