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  Genomewide SNP variation reveals relationships among landraces and modern varieties of rice

McNally, K., Childs, K., Bohnert, R., Davidson, R., Zhao, K., Ulat, V., et al. (2009). Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America, 106(30), 12273-12278. doi:10.1073/pnas.0900992106.

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Datensatz-Permalink: https://hdl.handle.net/21.11116/0000-000A-DDF8-6 Versions-Permalink: https://hdl.handle.net/21.11116/0000-000A-DDF9-5
Genre: Zeitschriftenartikel

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McNally, KL, Autor
Childs, KL, Autor
Bohnert, R, Autor           
Davidson, RM, Autor
Zhao, K, Autor
Ulat, VJ, Autor
Zeller, G1, Autor           
Clark, RM, Autor
Hoen, TR, Autor
Bureau, DE, Autor
Stokowski, R, Autor
Ballinger, DG, Autor
Frazer, KA, Autor
Cox, DR, Autor
Padhukasahasram, B, Autor
Bustamante, CD, Autor
Weigel, D1, Autor           
Mackill, DJ, Autor
Bruskiewich, RM, Autor
Rätsch, G, Autor           
Buell, CR, AutorLeung, H, AutorLeach, JE, Autor mehr..
Affiliations:
1Department Molecular Biology, Max Planck Institute for Developmental Biology, Max Planck Society, ou_3375790              

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Schlagwörter: -
 Zusammenfassung: Rice, the primary source of dietary calories for half of humanity, is the first crop plant for which a high-quality reference genome sequence from a single variety was produced. We used resequencing microarrays to interrogate 100 Mb of the unique fraction of the reference genome for 20 diverse varieties and landraces that capture the impressive genotypic and phenotypic diversity of domesticated rice. Here, we report the distribution of 160,000 nonredundant SNPs. Introgression patterns of shared SNPs revealed the breeding history and relationships among the 20 varieties; some introgressed regions are associated with agronomic traits that mark major milestones in rice improvement. These comprehensive SNP data provide a foundation for deep exploration of rice diversity and gene-trait relationships and their use for future rice improvement.

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 Datum: 2009-07
 Publikationsstatus: Erschienen
 Seiten: -
 Ort, Verlag, Ausgabe: -
 Inhaltsverzeichnis: -
 Art der Begutachtung: -
 Identifikatoren: DOI: 10.1073/pnas.0900992106
PMID: 19597147
 Art des Abschluß: -

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Titel: Proceedings of the National Academy of Sciences of the United States of America
  Andere : PNAS
  Andere : Proceedings of the National Academy of Sciences of the USA
  Kurztitel : Proc. Natl. Acad. Sci. U. S. A.
Genre der Quelle: Zeitschrift
 Urheber:
Affiliations:
Ort, Verlag, Ausgabe: Washington, D.C. : National Academy of Sciences
Seiten: - Band / Heft: 106 (30) Artikelnummer: - Start- / Endseite: 12273 - 12278 Identifikator: ISSN: 0027-8424
CoNE: https://pure.mpg.de/cone/journals/resource/954925427230