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  Revisiting a challenging p53 binding site: a diversity-optimized HEFLib reveals diverse binding modes in T-p53C-Y220C

Stahlecker, J., Klett, T., Schwer, M., Jaag, S., Dammann, M., Ernst, L., et al. (2022). Revisiting a challenging p53 binding site: a diversity-optimized HEFLib reveals diverse binding modes in T-p53C-Y220C. RSC Medicinal Chemistry, 13(12), 1575-1586. doi:10.1039/D2MD00246A.

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 Creators:
Stahlecker, J, Author
Klett, T, Author
Schwer, M, Author
Jaag, S, Author
Dammann, M, Author
Ernst, LN, Author
Braun, MB, Author
Zimmermann, MO, Author
Kramer, M, Author
Lämmerhofer, M, Author
Stehle, T, Author
Coles, M1, 2, Author                 
Boeckler, FM, Author
Affiliations:
1Department Protein Evolution, Max Planck Institute for Biology Tübingen, Max Planck Society, ou_3371683              
2Transmembrane Signal Transduction Group, Department Protein Evolution, Max Planck Institute for Biology Tübingen, Max Planck Society, ou_3477412              

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 Abstract: The cellular tumor antigen p53 is a key component in cell cycle control. The mutation Y220C heavily destabilizes the protein thermally but yields a druggable crevice. We have screened the diversity-optimized halogen-enriched fragment library against T-p53C-Y220C with STD-NMR and DSF to identify hits, which we validated by 1H,15N-HSQC NMR. We could identify four hits binding in the Y220C cleft, one hit binding covalently and four hits binding to an uncharacterized binding site. Compound 1151 could be crystallized showing a flip of C220 and thus opening subsite 3. Additionally, 4482 was identified to alkylate cysteines. Data shows that the diversity-optimized HEFLib leads to multiple diverse hits. The identified scaffolds can be used to further optimize interactions with T-p53C-Y220C and increase thermal stability.

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 Dates: 2022-102022-12
 Publication Status: Issued
 Pages: -
 Publishing info: -
 Table of Contents: -
 Rev. Type: -
 Identifiers: DOI: 10.1039/D2MD00246A
PMID: 36561072
 Degree: -

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Title: RSC Medicinal Chemistry
  Abbreviation : RSC Med. Chem.
Source Genre: Journal
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Publ. Info: Cambridge : Royal Socitey of Chemistry (RSC)
Pages: - Volume / Issue: 13 (12) Sequence Number: - Start / End Page: 1575 - 1586 Identifier: ISSN: 2040-2511
CoNE: https://pure.mpg.de/cone/journals/resource/2040-2511