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  Pareto optimality, economy–effectiveness trade-offs and ion channel degeneracy: improving population modelling for single neurons

Jedlicka, P., Bird, A. D., & Cuntz, H. (2022). Pareto optimality, economy–effectiveness trade-offs and ion channel degeneracy: improving population modelling for single neurons. Open Biology, 12(7):. doi:10.1098/rsob.220073.

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アイテムのパーマリンク: https://hdl.handle.net/21.11116/0000-000C-857A-5 版のパーマリンク: https://hdl.handle.net/21.11116/0000-000C-857B-4
資料種別: 学術論文

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Jedlicka_2022_ParetoOptimality.pdf (出版社版), 2MB
ファイルのパーマリンク:
https://hdl.handle.net/21.11116/0000-000C-857C-3
ファイル名:
Jedlicka_2022_ParetoOptimality.pdf
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-
OA-Status:
Gold
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公開
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application/pdf / [MD5]
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著作権日付:
2022
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Copyright © 2022 The Authors

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 作成者:
Jedlicka, Peter, 著者
Bird, Alexander D.1, 2, 著者
Cuntz, Hermann1, 2, 著者                 
所属:
1Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Max Planck Society, Deutschordenstr. 46, 60528 Frankfurt, DE, ou_2074314              
2Cuntz Lab, Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Max Planck Society, ou_3381227              

内容説明

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キーワード: Pareto front, energy efficiency, multi-objective optimization, parameter space, performance space, ion channel correlations
 要旨: Neurons encounter unavoidable evolutionary trade-offs between multiple tasks. They must consume as little energy as possible while effectively fulfilling their functions. Cells displaying the best performance for such multi-task trade-offs are said to be Pareto optimal, with their ion channel configurations underpinning their functionality. Ion channel degeneracy, however, implies that multiple ion channel configurations can lead to functionally similar behaviour. Therefore, instead of a single model, neuroscientists often use populations of models with distinct combinations of ionic conductances. This approach is called population (database or ensemble) modelling. It remains unclear, which ion channel parameters in the vast population of functional models are more likely to be found in the brain. Here we argue that Pareto optimality can serve as a guiding principle for addressing this issue by helping to identify the subpopulations of conductance-based models that perform best for the trade-off between economy and functionality. In this way, the high-dimensional parameter space of neuronal models might be reduced to geometrically simple low-dimensional manifolds, potentially explaining experimentally observed ion channel correlations. Conversely, Pareto inference might also help deduce neuronal functions from high-dimensional Patch-seq data. In summary, Pareto optimality is a promising framework for improving population modelling of neurons and their circuits.

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 日付: 2022-07-132022-07
 出版の状態: 出版
 ページ: -
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 目次: -
 査読: 査読あり
 識別子(DOI, ISBNなど): DOI: 10.1098/rsob.220073
 学位: -

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出版物 1

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出版物名: Open Biology
種別: 学術雑誌
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出版社, 出版地: -
ページ: - 巻号: 12 (7) 通巻号: 220073 開始・終了ページ: - 識別子(ISBN, ISSN, DOIなど): ISSN: 2046-2441