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  Reconstructing in-depth activity for chaotic 3D spatiotemporal excitable media models based on surface data

Stenger, R., Herzog, S., Kottlarz, I., Rüchardt, B., Luther, S., Wörgötter, F., et al. (2023). Reconstructing in-depth activity for chaotic 3D spatiotemporal excitable media models based on surface data. Chaos: An Interdisciplinary Journal of Nonlinear Science, 33: 013134. doi:10.1063/5.0126824.

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 Creators:
Stenger, R.1, Author           
Herzog, S.1, Author           
Kottlarz, I.1, Author           
Rüchardt, B.1, Author           
Luther, S.1, Author           
Wörgötter, F., Author
Parlitz, U.1, Author           
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1Research Group Biomedical Physics, Max Planck Institute for Dynamics and Self-Organization, Max Planck Society, ou_2063288              

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 Abstract: Motivated by potential applications in cardiac research, we consider the task of reconstructing the dynamics within a spatiotemporal chaotic 3D excitable medium from partial observations at the surface. Three artificial neural network methods (a spatiotemporal convolutional long-short-term-memory, an autoencoder, and a diffusion model based on the U-Net architecture) are trained to predict the dynamics in deeper layers of a cube from observational data at the surface using data generated by the Barkley model on a 3D domain. The results show that despite the high-dimensional chaotic dynamics of this system, such cross-prediction is possible, but non-trivial and as expected, its quality decreases with increasing prediction depth.

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Language(s): eng - English
 Dates: 2023-01-232023
 Publication Status: Issued
 Pages: -
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 Table of Contents: -
 Rev. Type: Peer
 Identifiers: DOI: 10.1063/5.0126824
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Title: Chaos: An Interdisciplinary Journal of Nonlinear Science
Source Genre: Journal
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Publ. Info: Woodbury : American Institute of Physics
Pages: 10 Volume / Issue: 33 Sequence Number: 013134 Start / End Page: - Identifier: ISSN: 1089-7682
CoNE: https://pure.mpg.de/cone/journals/resource/1089-7682