The Graphical Query Language: a tool for analysis of gene expression 
time-courses

Costa, Ivan G.; Schoenhuth, Alexander; Schliep, Alexander

doi:10.1093/bioinformatics/bti311

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The Graphical Query Language: a tool for analysis of gene expression time-courses

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Costa, Ivan G.
Dept. of Computational Molecular Biology (Head: Martin Vingron), Max Planck Institute for Molecular Genetics, Max Planck Society;

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Schliep, Alexander
Dept. of Computational Molecular Biology (Head: Martin Vingron), Max Planck Institute for Molecular Genetics, Max Planck Society;

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Citation

Costa, I. G., Schoenhuth, A., & Schliep, A. (2005). The Graphical Query Language: a tool for analysis of gene expression time-courses. Bioinformatics, 21(10), 2544-2545. doi:10.1093/bioinformatics/bti311.

Cite as: https://hdl.handle.net/11858/00-001M-0000-0010-86E1-3

Abstract

Summary: The Graphical Query Language (GQL) is a set of tools for the analysis of gene expression time-courses. They allow a user to pre-process the data, to query it for interesting patterns, to perform model-based clustering or mixture estimation, to include subsequent refinements of clusters and, finally, to use other biological resources to evaluate the results. Analyses are carried out in a graphical and interactive environment, allowing expert intervention in all stages of the data analysis.