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Short-chain aurachin D derivatives are selective inhibitors of E. coli cytochrome bd-I and bd-II oxidases

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Radloff,  Melanie
Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Grund,  Tamara N.
Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Witte,  Luca F.
Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Xie,  Hao
Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, Max Planck Society;

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Safarian,  Schara
Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, Max Planck Society;

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引用

Radloff, M., Elamri, I., Grund, T. N., Witte, L. F., Hohmann, K. F., Nakagaki, S., Goojani, H. G., Nasiri, H., Miyoshi, H., Bald, D., Xie, H., Sakamoto, J., Schwalbe, H., & Safarian, S. (2021). Short-chain aurachin D derivatives are selective inhibitors of E. coli cytochrome bd-I and bd-II oxidases. Scientific Reports, 11(1):. doi:10.1038/s41598-021-03288-7.


引用: https://hdl.handle.net/21.11116/0000-0009-A3DC-7
要旨
Cytochrome bd-type oxidases play a crucial role for survival of pathogenic bacteria during infection and proliferation. This role and the fact that there are no homologues in the mitochondrial respiratory chain qualify cytochrome bd as a potential antimicrobial target. However, few bd oxidase selective inhibitors have been described so far. In this report, inhibitory effects of Aurachin C (AurC-type) and new Aurachin D (AurD-type) derivatives on oxygen reductase activity of isolated terminal bd-I, bd-II and bo3 oxidases from Escherichia coli were potentiometrically measured using a Clark-type electrode. We synthesized long- (C10, decyl or longer) and short-chain (C4, butyl to C8, octyl) AurD-type compounds and tested this set of molecules towards their selectivity and potency. We confirmed strong inhibition of all three terminal oxidases for AurC-type compounds, whereas the 4(1H)-quinolone scaffold of AurD-type compounds mainly inhibits bd-type oxidases. We assessed a direct effect of chain length on inhibition activity with highest potency and selectivity observed for heptyl AurD-type derivatives. While Aurachin C and Aurachin D are widely considered as selective inhibitors for terminal oxidases, their structure-activity relationship is incompletely understood. This work fills this gap and illustrates how structural differences of Aurachin derivatives determine inhibitory potency and selectivity for bd-type oxidases of E. coli.