Researcher Portfolio
Fauster, T.
Surface Science (OP), Max Planck Institute for Plasma Physics, Max Planck Society
Researcher Profile
Position: Surface Science (OP), Max Planck Institute for Plasma Physics, Max Planck Society
Researcher ID: https://pure.mpg.de/cone/persons/resource/persons109064
Publications
: Schmitt, L. T., Paszkowski-Rogacz, M., Jug, F., & Buchholz, F. (2022). Prediction of designer-recombinases for DNA editing with generative deep learning. Nature communications, 13(1): 7966. doi:10.1038/s41467-022-35614-6. [PubMan] : Sayed, S., Paszkowski-Rogacz, M., Schmitt, L. T., & Buchholz, F. (2019). CRISPR/Cas9 as a tool to dissect cancer mutations. Methods (San Diego, Calif.), 164/165, 36-48. doi:10.1016/j.ymeth.2019.05.007. [PubMan] : Güneş, C., Paszkowski-Rogacz, M., Rahmig, S., Khattak, S., Camgöz, A., Wermke, M., Dahl, A., Bornhäuser, M., Waskow, C., & Buchholz, F. (2019). Comparative RNAi Screens in Isogenic Human Stem Cells Reveal SMARCA4 as a Differential Regulator. Stem cell reports, 12(5), 1084-1098. doi:10.1016/j.stemcr.2019.03.012. [PubMan] : Winzi, M., Vila, N. C., Paszkowski-Rogacz, M., Ding, L., Noack, S., Theis, M., Butter, F., & Buchholz, F. (2018). The long noncoding RNA lncR492 inhibits neural differentiation of murine embryonic stem cells. PloS one, 13(1): e191682. doi:10.1371/journal.pone.0191682. [PubMan] : Chakraborty, D., Paszkowski-Rogacz, M., Berger, N., Ding, L., Mircetic, J., Fu, J., Iesmantavicius, V., Choudhary, C., Anastassiadis, K., Stewart, A. F., & Buchholz, F. (2017). lncRNA Panct1 Maintains Mouse Embryonic Stem Cell Identity by Regulating TOBF1 Recruitment to Oct-Sox Sequences in Early G1. Cell reports, 21(11), 3012-3021. doi:10.1016/j.celrep.2017.11.045. [PubMan] : Mircetic, J., Dietrich, A., Paszkowski-Rogacz, M., Krause, M., & Buchholz, F. (2017). Development of a genetic sensor that eliminates p53 deficient cells. Nature communications, 8(1): 1463. doi:10.1038/s41467-017-01688-w. [PubMan] : Jahn, A., Rane, G., Paszkowski-Rogacz, M., Sayols, S., Bluhm, A., Han, C.-T., Draškovič, I., Londoño-Vallejo, J. A., Kumar, A. P., Buchholz, F., Butter, F., & Kappei, D. (2017). ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator. EMBO reports, 18(6), 929-946. doi:10.15252/embr.201744095. [PubMan] : Kappei, D., Scheibe, M., Paszkowski-Rogacz, M., Bluhm, A., Gossmann, T. I., Dietz, S., Dejung, M., Herlyn, H., Buchholz, F., Mann, M., & Butter, F. (2017). Phylointeractomics reconstructs functional evolution of protein binding. Nature communications, 8: 14334. doi:10.1038/ncomms14334. [PubMan] : Gebler, C., Lohoff, T., Paszkowski-Rogacz, M., Mircetic, J., Chakraborty, D., Camgoz, A., Hamann, M. V., Theis, M., Thiede, C., & Buchholz, F. (2017). Inactivation of Cancer Mutations Utilizing CRISPR/Cas9. Journal of the National Cancer Institute, 109(1): djw183. doi:10.1093/jnci/djw183. [PubMan] : Karpinski, J., Hauber, I., Chemnitz, J., Schäfer, C., Paszkowski-Rogacz, M., Chakraborty, D., Beschorner, N., Hofmann-Sieber, H., Lange, U. C., Grundhoff, A., Hackmann, K., Schrock, E., Abi-Ghanem, J., Pisabarro, M. T., Surendranath, V., Schambach, A., Lindner, C., Lunzen, J. v., Hauber, J., & Buchholz, F. (2016). Directed evolution of a recombinase that excises the provirus of most HIV-1 primary isolates with high specificity. Nature biotechnology, 34(4), 401-409. [PubMan] : Theis, M., Paszkowski-Rogacz, M., Weisswange, I., Chakraborty, D., & Buchholz, F. (2015). Targeting Human Long Noncoding Transcripts by Endoribonuclease-Prepared siRNAs. Journal of Biomolecular Screening, 20(8), 1018-1026. [PubMan] : Ding, L., Paszkowski-Rogacz, M., Winzi, M., Chakraborty, D., Theis, M., Singh, S., Ciotta, G., Poser, I., Roguev, A., Chu, W. K., Choudhary, C., Mann, M., Stewart, A. F., Krogan, N. J., & Buchholz, F. (2015). Systems Analyses Reveal Shared and Diverse Attributes of Oct4 Regulation in Pluripotent Cells. Cell Systems, 1(2), 141-151. [PubMan] : Winzi, M., Paszkowski-Rogacz, M., & Buchholz, F. (2014). Another Brick in the Wall: RNAi Screens Identify New Barriers in iPSC Reprogramming. Cell Stem Cell, 15(2), 116-118. [PubMan] : Ding, L., Poser, I., Paszkowski-Rogacz, M., & Buchholz, F. (2012). From RNAi screens to molecular function in embryonic stem cells. Stem Cell Reviews, 8(1), 32-42. [PubMan] : Chakraborty, D., Kappei, D., Theis, M., Nitzsche, A., Ding, L., Paszkowski-Rogacz, M., Surendranath, V., Berger, N., Schulz, H., Saar, K., Hubner, N., & Buchholz, F. (2012). Combined RNAi and localization for functionally dissecting long non-coding RNAs. Nature Methods, 9(4), 360-362. [PubMan] : Ross, K., Sedello, A., Todd, G. P., Paszkowski-Rogacz, M., Bird, A. W., Ding, L., Grinenko, T., Behrens, K., Hubner, N., Mann, M., Waskow, C., Stocking, C., & Buchholz, F. (2012). Polycomb group ring finger 1 cooperates with Runx1 in regulating differentiation and self-renewal of hematopoietic cells. Blood, 119(18), 4152-4161. [PubMan] : Nitzsche, A., Paszkowski-Rogacz, M., Matarese, F., Janssen-Megens, E. M., Hubner, N. C., Schulz, H., Vries, I. d., Ding, L., Huebner, N., Mann, M., Stunnenberg, H. G., & Buchholz, F. (2011). RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity. PLoS ONE, 6(5): e19470. [PubMan] : Krastev, D., Slabicki, M., Paszkowski-Rogacz, M., Hubner, N. C., Junqueira, M., Shevchenko, A., Mann, M., Neugebauer, K. M., & Buchholz, F. (2011). A systematic RNAi synthetic interaction screen reveals a link between p53 and snoRNP assembly. Nature Cell Biology, 13(7), 809-818. [PubMan] : Paszkowski-Rogacz, M., Slabicki, M., Pisabarro, M. T., & Buchholz, F. (2010). PhenoFam-gene set enrichment analysis through protein structural information. BMC Bioinformatics, 11: 254. [PubMan] : Paszkowski-Rogacz, M. (2010). Integration and analysis of phenotypic data from functional screens. PhD Thesis, Technische Universität, Dresden. [PubMan] : Slabicki, M., Theis, M., Krastev, D., Samsonov, S., Mundwiller, E., Junqueira, M., Paszkowski-Rogacz, M., Teyra, J., Heninger, A.-K., Poser, I., Prieur, F., Truchetto, J., Confavreux, C., Marelli, C., Durr, A., Camdessanche, J. P., Brice, A., Shevchenko, A., Pisabarro, M. T., Stevanin, G., & Buchholz, F. (2010). A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia. PLoS Biology, 8(6): e1000408. [PubMan] : Theis, M., Slabicki, M., Junqueira, M., Paszkowski-Rogacz, M., Sontheimer, J., Kittler, R., Heninger, A.-K., Glatter, T., Kruusmaa, K., Poser, I., Hyman, A. A., Pisabarro, M. T., Gstaiger, M., Aebersold, R., Shevchenko, A., & Buchholz, F. (2009). Comparative profiling identifies C13orf3 as a component of the Ska complex required for mammalian cell division. EMBO Journal, 28(10), 1453-1465. [PubMan] : Ding, L., Paszkowski-Rogacz, M., Nitzsche, A., Slabicki, M. M., Heninger, A.-K., Vries, I. d., Kittler, R., Junqueira, M., Shevchenko, A., Schulz, H., Hubner, N., Doss, M. X., Sachinidis, A., Hescheler, J., Iacone, R., Anastassiadis, K., Stewart, A. F., Pisabarro, M. T., Caldarelli, A., Poser, I., Theis, M., & Buchholz, F. (2009). A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity. Cell Stem Cell, 4(5), 403-415. [PubMan]