Researcher Portfolio
Franzen, Peter
Experimental Plasma Physics 1 (E1), Max Planck Institute for Plasma Physics, Max Planck Society, ITER Technology & Diagnostics (ITED), Max Planck Institute for Plasma Physics, Max Planck Society, Surface Science (OP), Max Planck Institute for Plasma Physics, Max Planck Society, Technology (TE), Max Planck Institute for Plasma Physics, Max Planck Society
Researcher Profile
Position: ITER Technology & Diagnostics (ITED), Max Planck Institute for Plasma Physics, Max Planck Society
Position: Experimental Plasma Physics 1 (E1), Max Planck Institute for Plasma Physics, Max Planck Society
Position: Surface Science (OP), Max Planck Institute for Plasma Physics, Max Planck Society
Position: Technology (TE), Max Planck Institute for Plasma Physics, Max Planck Society
Researcher ID: https://pure.mpg.de/cone/persons/resource/persons109107
Publications
: Schmitt, L. T., Paszkowski-Rogacz, M., Jug, F., & Buchholz, F. (2022). Prediction of designer-recombinases for DNA editing with generative deep learning. Nature communications, 13(1): 7966. doi:10.1038/s41467-022-35614-6. [PubMan] : Sayed, S., Paszkowski-Rogacz, M., Schmitt, L. T., & Buchholz, F. (2019). CRISPR/Cas9 as a tool to dissect cancer mutations. Methods (San Diego, Calif.), 164/165, 36-48. doi:10.1016/j.ymeth.2019.05.007. [PubMan] : Güneş, C., Paszkowski-Rogacz, M., Rahmig, S., Khattak, S., Camgöz, A., Wermke, M., Dahl, A., Bornhäuser, M., Waskow, C., & Buchholz, F. (2019). Comparative RNAi Screens in Isogenic Human Stem Cells Reveal SMARCA4 as a Differential Regulator. Stem cell reports, 12(5), 1084-1098. doi:10.1016/j.stemcr.2019.03.012. [PubMan] : Winzi, M., Vila, N. C., Paszkowski-Rogacz, M., Ding, L., Noack, S., Theis, M., Butter, F., & Buchholz, F. (2018). The long noncoding RNA lncR492 inhibits neural differentiation of murine embryonic stem cells. PloS one, 13(1): e191682. doi:10.1371/journal.pone.0191682. [PubMan] : Chakraborty, D., Paszkowski-Rogacz, M., Berger, N., Ding, L., Mircetic, J., Fu, J., Iesmantavicius, V., Choudhary, C., Anastassiadis, K., Stewart, A. F., & Buchholz, F. (2017). lncRNA Panct1 Maintains Mouse Embryonic Stem Cell Identity by Regulating TOBF1 Recruitment to Oct-Sox Sequences in Early G1. Cell reports, 21(11), 3012-3021. doi:10.1016/j.celrep.2017.11.045. [PubMan] : Mircetic, J., Dietrich, A., Paszkowski-Rogacz, M., Krause, M., & Buchholz, F. (2017). Development of a genetic sensor that eliminates p53 deficient cells. Nature communications, 8(1): 1463. doi:10.1038/s41467-017-01688-w. [PubMan] : Jahn, A., Rane, G., Paszkowski-Rogacz, M., Sayols, S., Bluhm, A., Han, C.-T., Draškovič, I., Londoño-Vallejo, J. A., Kumar, A. P., Buchholz, F., Butter, F., & Kappei, D. (2017). ZBTB48 is both a vertebrate telomere-binding protein and a transcriptional activator. EMBO reports, 18(6), 929-946. doi:10.15252/embr.201744095. [PubMan] : Kappei, D., Scheibe, M., Paszkowski-Rogacz, M., Bluhm, A., Gossmann, T. I., Dietz, S., Dejung, M., Herlyn, H., Buchholz, F., Mann, M., & Butter, F. (2017). Phylointeractomics reconstructs functional evolution of protein binding. Nature communications, 8: 14334. doi:10.1038/ncomms14334. [PubMan] : Gebler, C., Lohoff, T., Paszkowski-Rogacz, M., Mircetic, J., Chakraborty, D., Camgoz, A., Hamann, M. V., Theis, M., Thiede, C., & Buchholz, F. (2017). Inactivation of Cancer Mutations Utilizing CRISPR/Cas9. Journal of the National Cancer Institute, 109(1): djw183. doi:10.1093/jnci/djw183. [PubMan] : Karpinski, J., Hauber, I., Chemnitz, J., Schäfer, C., Paszkowski-Rogacz, M., Chakraborty, D., Beschorner, N., Hofmann-Sieber, H., Lange, U. C., Grundhoff, A., Hackmann, K., Schrock, E., Abi-Ghanem, J., Pisabarro, M. T., Surendranath, V., Schambach, A., Lindner, C., Lunzen, J. v., Hauber, J., & Buchholz, F. (2016). Directed evolution of a recombinase that excises the provirus of most HIV-1 primary isolates with high specificity. Nature biotechnology, 34(4), 401-409. [PubMan] : Theis, M., Paszkowski-Rogacz, M., Weisswange, I., Chakraborty, D., & Buchholz, F. (2015). Targeting Human Long Noncoding Transcripts by Endoribonuclease-Prepared siRNAs. Journal of Biomolecular Screening, 20(8), 1018-1026. [PubMan] : Ding, L., Paszkowski-Rogacz, M., Winzi, M., Chakraborty, D., Theis, M., Singh, S., Ciotta, G., Poser, I., Roguev, A., Chu, W. K., Choudhary, C., Mann, M., Stewart, A. F., Krogan, N. J., & Buchholz, F. (2015). Systems Analyses Reveal Shared and Diverse Attributes of Oct4 Regulation in Pluripotent Cells. Cell Systems, 1(2), 141-151. [PubMan] : Winzi, M., Paszkowski-Rogacz, M., & Buchholz, F. (2014). Another Brick in the Wall: RNAi Screens Identify New Barriers in iPSC Reprogramming. Cell Stem Cell, 15(2), 116-118. [PubMan] : Ding, L., Poser, I., Paszkowski-Rogacz, M., & Buchholz, F. (2012). From RNAi screens to molecular function in embryonic stem cells. Stem Cell Reviews, 8(1), 32-42. [PubMan] : Chakraborty, D., Kappei, D., Theis, M., Nitzsche, A., Ding, L., Paszkowski-Rogacz, M., Surendranath, V., Berger, N., Schulz, H., Saar, K., Hubner, N., & Buchholz, F. (2012). Combined RNAi and localization for functionally dissecting long non-coding RNAs. Nature Methods, 9(4), 360-362. [PubMan] : Ross, K., Sedello, A., Todd, G. P., Paszkowski-Rogacz, M., Bird, A. W., Ding, L., Grinenko, T., Behrens, K., Hubner, N., Mann, M., Waskow, C., Stocking, C., & Buchholz, F. (2012). Polycomb group ring finger 1 cooperates with Runx1 in regulating differentiation and self-renewal of hematopoietic cells. Blood, 119(18), 4152-4161. [PubMan] : Nitzsche, A., Paszkowski-Rogacz, M., Matarese, F., Janssen-Megens, E. M., Hubner, N. C., Schulz, H., Vries, I. d., Ding, L., Huebner, N., Mann, M., Stunnenberg, H. G., & Buchholz, F. (2011). RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity. PLoS ONE, 6(5): e19470. [PubMan] : Krastev, D., Slabicki, M., Paszkowski-Rogacz, M., Hubner, N. C., Junqueira, M., Shevchenko, A., Mann, M., Neugebauer, K. M., & Buchholz, F. (2011). A systematic RNAi synthetic interaction screen reveals a link between p53 and snoRNP assembly. Nature Cell Biology, 13(7), 809-818. [PubMan] : Paszkowski-Rogacz, M., Slabicki, M., Pisabarro, M. T., & Buchholz, F. (2010). PhenoFam-gene set enrichment analysis through protein structural information. BMC Bioinformatics, 11: 254. [PubMan] : Paszkowski-Rogacz, M. (2010). Integration and analysis of phenotypic data from functional screens. PhD Thesis, Technische Universität, Dresden. [PubMan] : Slabicki, M., Theis, M., Krastev, D., Samsonov, S., Mundwiller, E., Junqueira, M., Paszkowski-Rogacz, M., Teyra, J., Heninger, A.-K., Poser, I., Prieur, F., Truchetto, J., Confavreux, C., Marelli, C., Durr, A., Camdessanche, J. P., Brice, A., Shevchenko, A., Pisabarro, M. T., Stevanin, G., & Buchholz, F. (2010). A genome-scale DNA repair RNAi screen identifies SPG48 as a novel gene associated with hereditary spastic paraplegia. PLoS Biology, 8(6): e1000408. [PubMan] : Theis, M., Slabicki, M., Junqueira, M., Paszkowski-Rogacz, M., Sontheimer, J., Kittler, R., Heninger, A.-K., Glatter, T., Kruusmaa, K., Poser, I., Hyman, A. A., Pisabarro, M. T., Gstaiger, M., Aebersold, R., Shevchenko, A., & Buchholz, F. (2009). Comparative profiling identifies C13orf3 as a component of the Ska complex required for mammalian cell division. EMBO Journal, 28(10), 1453-1465. [PubMan] : Ding, L., Paszkowski-Rogacz, M., Nitzsche, A., Slabicki, M. M., Heninger, A.-K., Vries, I. d., Kittler, R., Junqueira, M., Shevchenko, A., Schulz, H., Hubner, N., Doss, M. X., Sachinidis, A., Hescheler, J., Iacone, R., Anastassiadis, K., Stewart, A. F., Pisabarro, M. T., Caldarelli, A., Poser, I., Theis, M., & Buchholz, F. (2009). A genome-scale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity. Cell Stem Cell, 4(5), 403-415. [PubMan]