Researcher Portfolio
PD Dr. Henne, Thomas
Max Planck Institute for Legal History and Legal Theory, Max Planck Society, MPI for European Legal History, Max Planck Society
Researcher Profile
Position: Max Planck Institute for Legal History and Legal Theory, Max Planck Society
Position: MPI for European Legal History, Max Planck Society
Researcher ID: https://pure.mpg.de/cone/persons/resource/persons28538
Publications
(1 - 25 of 87)
: Martínez, J. R., Guillou, S., Le Prieur, S., Vittorio, P. D., Bonal, F., Taliadoros, D., Guéret, E., Fournier, E., Stukenbrock, E. H., Valade, R., & Gladieux, P. (2024). Deep population structure linked to host vernalization requirement in the barley net blotch fungal pathogen. Microbial Genomics, 10(5): 001241. doi:10.1099/mgen.0.001241. [PubMan] : van Westerhoven, A., Aguilera-Galvez, C., Nakasato-Tagami, G., Shi-Kunne, X., de la Parte, E. M., Carero, E. C., Meijer, H., Feurtey, A., Maryani, N., Ordóñez, N., Schneiders, H., Nijbroek, K., Wittenberg, A. H. J., Hofstede, R., García-Bastidas, F., Sørensen, E., Swennen, R., Stukenbrock, E. H., Kema, G., & Seidl, M. (2024). Segmental duplications drive the evolution of accessory regions in a major crop pathogen. New Phytologist, 242(2), 610-625. doi:10.1111/nph.19604. [PubMan] : Hewitt, T. C., Henningsen, E. C., Pereira, D., McElroy, K., Nazareno, E. S., Dugyala, S., Nguyen-Phuc, H., Li, F., Miller, M. E., Visser, B., Pretorius, Z. A., Boshoff, W. H., Sperschneider, J., Stukenbrock, E. H., Kianian, S. F., Dodds, P. N., & Figueroa, M. (2024). Genome-enabled analysis of population dynamics and virulence associated loci in the oat crown rust fungus Puccinia coronata f. sp. avenae. Molecular Plant-Microbe Interactions, 37(3), 290-303. doi:10.1101/2023.09.18.557855. [PubMan] : Habig, M., Grasse, A. V., Müller, J., Stukenbrock, E. H., Leitner, H., & Cremer, S. (2024). Frequent horizontal chromosome transfer between asexual fungal insect pathogens. PNAS, 121(11): e2316284121. doi:10.1073/pnas.2316284121. [PubMan] : Taliadoros, D., Feurtey, A., Wyatt, N., Gladieux, P., Friesen, T., & Stukenbrock, E. H. (2024). Emergence and spread of the barley net blotch pathogen coincided with crop domestication and cultivation history. PLOS Genetics, 20(1): e1010884. doi:10.1371/journal.pgen.1010884. [PubMan] : Wei, H., Zhong, Z., Li, Z., Zhang, Y., Stukenbrock, E. H., Tang, B., Yang, N., Baroncelli, R., Peng, L., Liu, Z., He, X., Yang, Y., & Yuan, Z. (2024). Loss of the accessory chromosome converts a pathogenic tree root fungus into a mutualistic endophyte. Plant Communications, 5(1): 100672. doi:10.1016/j.xplc.2023.100672. [PubMan] : Welgemoed, T., Duong, T. A., Barnes, I., Stukenbrock, E. H., & Berger, D. K. (2023). Population genomic analyses suggest recent dispersal events of the pathogen Cercospora zeina into East and Southern African maize cropping systems. G3 Genes|Genomes|Genetics, 13(11), jkad214. doi:10.1093/g3journal/jkad214. [PubMan] : Nelson, A. C., Kariyawasam, G., Wyatt, N. A., Li, J., Haueisen, J., Stukenbrock, E. H., Borowicz, P., Liu, Z., & Friesen, T. L. (in preparation). Unleashing the secrets of plant-fungal interactions using a transformation-free confocal staining technique that supports AI-assisted quantitative analysis. [PubMan] : Francisco, C. S., Abuhhalaf, M., Igelmann, C., Gustke, J., Habig, M., Cassidy, L., Tholey, A., & Stukenbrock, E. H. (submitted). The apoplastic space of two wheat genotypes provide highly different environment for pathogen colonization: Insights from proteome and microbiome profiling. [PubMan] : Komluski, J., Habig, M., & Stukenbrock, E. H. (2023). Repeat-Induced Point mutation and gene conversion coinciding with heterochromatin shape the genome of a plant-pathogenic fungus. mBio, 14(3): e03290-22. doi:10.1128/mbio.03290-22. [PubMan] : Taliadoros, D., & Stukenbrock, E. H. (2023). The use of evolutionary analyses to predict functionally relevant traits in filamentous plant pathogens. Current Opinion in Microbiology, 73: 102244. doi:10.1016/j.mib.2022.102244. [PubMan] : Lapalu, N., Lamothe, L., Petit, Y., Genissel, A., Delude, C., Feurtey, A., Abraham, L. N., Smith, D., King, R., Renwick, A., Appertet, M., Sucher, J., Steindorff, A. S., Goodwin, S. B., Kema, G. H., Grigoriev, I. V., Hane, J., Rudd, J., Stukenbrock, E., Croll, D., Scalliet, G., & Lebrun, M.-H. (submitted). Improved gene annotation of the fungal wheat pathogen Zymoseptoria tritici based on combined Iso-Seq and RNA-Seq evidence. [PubMan] : Guerreiro, M. A., Yurkov, A., Nowrousian, M., & Stukenbrock, E. H. (submitted). Lifestyle transitions in basidiomycetous fungi are reflected by tRNA composition and translation efficiency of metabolic genes. [PubMan] : Giraud, T., Ropars, J., Stukenbrock, E. H., Amato, K. R., & Rodriguez de la Vega, R. (2023). Evolutionary ecology of human‐associated microbes. Molecular Ecology, 32(10), 2369-2373. doi:10.1111/mec.16966. [PubMan] : Yuzon, J. D., Wyatt, N. A., Vasighzadeh, A., Clare, S., Navratil, E., Friesen, T. L., & Stukenbrock, E. H. (2023). Hybrid inferiority and genetic incompatibilities drive divergence of fungal pathogens infecting the same host. Genetics, 224(1): iyad037. doi:10.1093/genetics/iyad037. [PubMan] : Barsh, G. S., Butler, G., Copenhaver, G. P., Crosson, S., Søgaard-Andersen, L., & Stukenbrock, E. H. (2023). Endless microbes most beautiful and most wonderful. PLOS Genetics, 19(4): e1010695. doi:10.1371/journal.pgen.1010695. [PubMan] : Feurtey, A., Lorrain, C., McDonald, M. C., Milgate, A., Solomon, P. S., Warren, R., Puccetti, G., Scalliet, G., Torriani, S. F. F., Gout, L., Marcel, T. C., Suffert, F., Alassimone, J., Lipzen, A., Yoshinaga, Y., Daum, C., Barry, K., Grigoriev, I. V., Goodwin, S. B., Genissel, A., Seidl, M. F., Stukenbrock, E. H., Lebrun, M.-H., Kema, G. H. J., McDonald, B. A., & Croll, D. (2023). A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen. Nature Communications, 14: 1059. doi:10.1038/s41467-023-36674-y. [PubMan] : Wingfield, B. D., Berger, D. K., Coetzee, M. P. A., Duong, T. A., Martin, A., Pham, N. Q., van den Berg, N., Wilken, P. M., Arun-Chinnappa, K. S., Barnes, I., Buthelezi, S., Dahanayaka, B. A., Durán, A., Engelbrecht, J., Feurtey, A., Fourie, A., Fourie, G., Hartley, J., Kabwe, E. N. K., Maphosa, M., Narh Mensah, D. L., Nsibo, D. L., Potgieter, L., Poudel, B., Stukenbrock, E. H., Thomas, C., Vaghefi, N., Welgemoed, T., & Wingfield, M. J. (2022). IMA genome‑F17. IMA Fungus, 13: 19. doi:10.1186/s43008-022-00104-3. [PubMan] : Case, N. T., Berman, J., Blehert, D. S., Cramer, R. A., Cuomo, C., Currie, C. R., Ene, I. V., Fisher, M. C., Fritz-Laylin, L. K., Gerstein, A. C., Glass, N. L., Gow, N. A. R., Gurr, S. J., Hittinger, C. T., Hohl, T. M., Iliev, I. D., James, T. Y., Jin, H., Klein, B. S., Kronstad, J. W., Lorch, J. M., McGovern, V., Mitchell, A. P., Segre, J. A., Shapiro, R. S., Sheppard, D. C., Sil, A., Stajich, J. E., Stukenbrock, E. H., Taylor, J. W., Thompson, D., Wright, G. D., Heitman, J., & Cowen, L. E. (2022). The future of fungi: threats and opportunities. G3: Genes, Genomes, Genetics, 12(11): jkac224. doi:10.1093/g3journal/jkac224. [PubMan] : Komluski, J., Stukenbrock, E. H., & Habig, M. (2022). Non-Mendelian transmission of accessory chromosomes in fungi. Chromosome Research, 30, 241-253. doi:10.1007/s10577-022-09691-8. [PubMan] : Vasighzadeh, A., Sharifnabi, B., Javan-Nikkhah, M., & Stukenbrock, E. H. (2022). Infection experiments of Pyrenophora teres f. maculata on cultivated and wild barley indicate absence of host specificity. European Journal of Plant Pathology, 163, 749-759. doi:10.1007/s10658-022-02496-9. [PubMan] : Yuan, Z., Wu, Q., Xu, L., Druzhinina, I. S., Stukenbrock, E. H., Nieuwenhuis, B. P. S., Zhong, Z., Liu, Z.-J., Wang, X., Cai, F., Kubicek, C. P., Shan, X., Wang, J., Shi, G., Peng, L., & Martin, F. M. (2022). Genomic landscape of a relict fir-associated fungus reveals rapid convergent adaptation towards endophytism. The ISME Journal, 16, 1294-1305. doi:10.1038/s41396-021-01176-6. [PubMan] : Hassani, M. A., Oppong-Danquah, E., Feurtey, A., Tasdemir, D., & Stukenbrock, E. H. (2022). Differential regulation and production of secondary metabolites among isolates of the fungal wheat pathogen Zymoseptoria tritici. Applied and Environmental Microbiology, 88(6): e02296-21. doi:10.1128/aem.02296-21. [PubMan] : Meteyer, C. U., Dutheil, J. Y., Keel, M. K., Boyles, J. G., & Stukenbrock, E. H. (2022). Plant pathogens provide clues to the potential origin of bat white-nose syndromePseudogymnoascus destructans. Virulence, 13(1), 1020-1031. doi:10.1080/21505594.2022.2082139. [PubMan] : Alizadeh, A., Javan-Nikkhah, M., Nourmohammadi Nazarian, R., Liu, F., Zare, R., Fotouhifar, K. B., Stukenbrock, E. H., & Damm, U. (2022). New species of Colletotrichum from wild Poaceae and Cyperaceae plants in Iran. Mycologia, 114, 89-113. doi:10.1080/00275514.2021.2008765. [PubMan]